sex comb
 Kopp laboratory at the Department of Evolution and Ecology and Center for Genetics and Development
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The models


convergence
Pigmentation.

Insect pigmentation is one of the simplest morphological traits in any animal.  It is essentially a two-dimensional pattern of biopolymers deposited by epidermal cells.  Pigmentation does not require morphogenetic movements or complex cell behavior of any kind.  This relative simplicity provides us with an opportunity to develop a detailed mechanistic model that relates gene expression to the final phenotypic output. 
The most upstream events in the spatial patterning of pigmentation have been elucidated in our previous work.  In particular, every aspect of the adult abdominal pattern is accounted for by the action of known regulatory genes.  At the other end of the pathway, many of the structural genes involved in the production of various pigments have also been identified and characterized.  Moreover, the biochemistry of pigment synthesis is sufficiently well understood that we can predict the functions of many uncharacterized genes based on their sequence.  What remains to be done is to identify the missing components of this pathway, especially its intermediate regulatory tiers, and to understand the organization and properties of the system as a whole.
We are trying to reconstruct the entire developmental pathway that controls pigment patterning and synthesis in Drosophila melanogaster.  To accomplish this, we are combining genome-wide microarray experiments with targeted genetic designs made possible by the availability of many mutations in both upstream and downstream tiers of the developmental pathway.  Our ultimate goal is to develop predictive models that explain how positional information is translated into a morphological phenotype.

Pigmentation is also one of the most rapidly evolving traits in many animals, including Drosophila. Among the >3000 known species of Drosophila and related genera, an astonishing variety of pigmentation patterns is observed – from solid colors to stripes to polka-dots.  This diversity is a reflection of the differences in the underlying developmental pathways that control pigment patterning and synthesis. We try to identify these differences by comparing the development of pigmentation among several dozen of Drosophila species that we keep in the lab.  At the same time, we take advantage of the fact that many Drosophila species can be hybridized to take a more direct genetic approach, where we try to map and identify the genes responsible for differences in pigmentation within species or among closely related species.
One of our main interests is convergent evolution.  We are all familiar with the pictures of whales and sharks, bats and birds, and other textbook clichés.  But what is the molecular basis of convergence?  Does phenotypic similarity imply that the genes and developmental pathways responsible for producing these phenotypes are also similar?  Or can superficial resemblance be produced by entirely different molecular mechanisms?  Darker or lighter pigmentation has evolved many times in different evolutionary lineages of Drosophila, giving us an opportunity to address this question.

pigm structural
pigm regulatory
pigm mutants

Sex comb development.

The sex comb of Drosophila is a male-specific array of modified bristles that develops at a precise position on the first pair of legs from a set of precursor bristles present in both sexes.  This little structure has surprisingly complicated development, providing us with an excellent model to study the organization of developmental pathways.  It is known from genetic studies that the developing sex comb integrates a very large number of upstream regulatory inputs: the sex determination pathway, the HOX genes, proximo-distal leg patterning genes, and the Hedgehog, Wnt, Dpp (TGF-b) and Notch signaling pathways. This integration is presumably achieved through joint regulation of target genes, which remain unknown.  Identification of these genes and analysis of their regulation will help elucidate how diverse regulatory inputs are integrated during development, and how abstract spatial information provided by regulatory genes is interpreted by cells and translated into a morphogenetic output.  As with our other models, we use a combination of classical developmental genetics and microarray-based techniques to reconstruct the genetic circuit that controls sex comb development.

    Sex comb is also a very recent evolutionary innovation.  Most Drosophila species do not have sex combs, although the precursor bristles are always present.  Among the flies that do have it, the size and structure of the sex comb show dramatic variation, ranging from a pair of simple straight bristles to seriously over-sexed flies that have over 150 curved teeth arranged in an enormous spoon-like structure.  By comparing sex comb development among these species, and by using combless species as outgroups, we hope to reconstruct the history of evolutionary assembly and modification of a new developmental pathway.  At the same time, we are analyzing microevolutionary variation in this pathway in a group of closely related Southeast Asian Drosophila species. 

sex comb precursors
sex comb development
microarray

Sexually dimorphic development of sensory systems.

    Mating behavior in Drosophila depends on the reception and interpretation of sexually dimorphic chemical, visual, and auditory cues.  For this reason, many aspects of sensory system development and function are also expected to be sexually dimorphic.  Indeed, we have found a number of genes whose expression in the sensory organs differs between males and females. Many of these genes encode olfactory receptors and odorant-binding proteins, molecules involved in neurotransmission, and transcription factors that may function in directing sexually dimorphic differentiation of chemoreceptive neurons and support cells.  By analyzing the function of individual genes and the structure of the developmental pathway that controls their expression, we hope to understand the genetic control of sexual behavior.  Now, if only that could be done for humans…